Notes
Slide Show
Outline
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Overview
  • What is the Adirondack ATBI Initiative


  • Two parts to the biodiversity inventory:
    • Science
    • Citizen participation

  • Upcoming ATBI Activities and Opportunities



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Core Traits of Adirondack ATBI:
  • All Adirondacks
  • All taxonomic groups
  • Public and private collaboration
  • Strong citizen participation
  • Education role


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Mission
  • Survey the diversity of life and connect people to the natural world through participation in biological inventories and related activities in the Adirondack Park of New York State.
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Biodiversity Inventory
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Ecosystem Framework
  • Stratified


  • Standardized Sampling Protocols


  • Spatially-referenced


  • Direct future analyses
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Taxonomic Working Groups (TWIGS)
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Discovery
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Citizen Participation
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Appreciation of Place-Based Biodiversity through Art, Culture and Community
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Activities
  • Discover the Dragonflies
    • July 29, Newcomb VIC
    • August 19, Paul Smiths VIC
    • September 15, NHMA Wild Center (K-12)


  • Other
    • Aug 9 ATBI talk Paul Smiths VIC
    • July 30-Aug 4 Aquatic Plant
    • Workshop, Paul Smiths College
    • Mid-October GPS Workshop,
    • Adirondack Ecological Center



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Getting Involved
  • Field Inventory
    • Volunteer
    • Lead sampling for your taxon of choice!
  • Committees
    • Science – organize Taxonomic Working Groups
    • Community Outreach – get message out, organize volunteers
    • Education – coordinate with schools, hold training workshops

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On the Cutting Edge
of Biotechnology:
DNA Barcoding and the ATBI
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Biodiversity studies are limited by availability of taxonomists
  • 1.7 million species of plants and animals are known
  • There could be as many as 10 million or even 100 million species on the planet
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"DNA barcoding is the idea..."
  • DNA barcoding is the idea that a short genetic sequence is enough to identify nearly every species
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What DNA sequence has the right level of variability to serve as a species identifier?
  • The sequence of the cytochrome oxidase I gene is just right in terms of variability to serve as a species biomarker
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"The DNA “barcode"
  • The DNA “barcode” is a sequence of about 650 DNA letters of the mitochondrial COI gene.
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"an international initiative devoted to..."
  • an international initiative devoted to developing DNA barcoding as a global standard in taxonomy
  • CBOL has more than 100 member organizations from 40 countries
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How does barcoding work?
  • DNA sequence from an organism is obtained
  • Sequence data is entered into a large, public-access database
  • The “best match” to the input sequence provides species identification
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Successes in the classroom
  • In a local classroom, Schroon Lake high school teacher, Cookie Barker, has performed genetic analysis of the deer population using mitochondrial genes
  • Her classroom has processed hundreds of deer and brook trout samples for analysis
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"The ATBI can contribute to"
  • The ATBI can contribute to, use and test the barcoding system
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DNA barcoding may allow the identification of cryptic species
  • A butterfly, Astraptes fulgerator, was recently found, through DNA barcoding, to actually be comprised of 16 different species all of which look identical as adults
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"DNA barcoding allows us to..."
  • DNA barcoding allows us to identify species at any life stage and even if the organism is not there in it’s entirety
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"DNA barcoding has been used..."
  • DNA barcoding has been used to estimate diversity of stomatopods at the planktonic, larval stage
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"Is this an Allen’s or..."
  • Is this an Allen’s or Rufus hummingbird?
  • The species id was made using a single feather found under a feeder
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Nano-scale DNA sequencing
  • Microfabricated bioprocessor for integrated nanoliter-scale DNA sequencing (reported in May 9, 2006 PNAS)
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Convinced?
  • How do we start?
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It’s all about the toys?
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"http://library.paulsmiths.edu/ATBI/index.htm"
  • http://library.paulsmiths.edu/ATBI/index.htm